YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90962543, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGIILAGGS GTRLYPITRG ISKQLIPIYD KPMIYYPLST LMLAGITDIL VISTPEFTPL  60
   61 FEQLLGDGAE WGISLTYKVQ EKPNGLAEAF ILGADFIGDD SVCLILGDNI YYGSGLSKLV 120
  121 QEAAQKTDGA TVFGYHVNDP ERFGVVEFDS NMKALSIEEK PEKPKSNYAV TGLYFYDNTV 180
  181 VEKAKNLKPS DRGELEITDI NKLYLDEGKL DVKVMGRGYA WLDTGTHDSM MDAASFIATI 240
  241 QKRQNLKVAC LEEIAYRMGY ISKEKLVELA QPMKKNDYGQ YLLRLAKEQ

Type	Start	End	Confidence
Cytoplasmic	1	32	0.58
Transmembrane Helix	33	52	0.58
Non-Cytoplasmic	53	289	0.98