YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94408016
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRRDAWEG SSWRFIKMAE AEDSPGEQEA AASKPLFAGL SDVSISQDIP IEGEITIPSR  60
   61 ARAQEHDSST LNESIRRTIM RDLKAVGRKF MHVLYPRKSN ALLRDWDLWG PLILCVTLAL 120
  121 MLQKSSIDGK NDGGGPEFAE VFVIIWFGAV TITLNSKLLG GNISFFQSLC VLGYCILPLN 180
  181 IAMLICRLLL LAGQGPINFM IRLFVVLLMF AWSVVASTAF LADSQPPNRK ALAVYPVFLF 240
  241 YFVISWMILT FTP

Type	Start	End	Confidence
Cytoplasmic	1	105	0.97
Transmembrane Helix	106	125	0.88
Non-Cytoplasmic	126	137	0.84
Transmembrane Helix	138	159	0.84
Cytoplasmic	160	169	0.72
Transmembrane Helix	170	191	0.93
Non-Cytoplasmic	192	198	0.83
Transmembrane Helix	199	222	0.91
Cytoplasmic	223	230	0.90
Transmembrane Helix	231	250	0.95
Non-Cytoplasmic	251	253	0.71