YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94400503
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKDITDLVM RGIHKCLKVT SGQSTTLAKD KKDIGQEDNE SPPAFLERII ETFRQYTPMD  60
   61 LELPEAKADS FYHPEKVDTV AVVAAAGAGE PLSPEELLLK AEAEKGDDDE LDDEDDELDK 120
  121 TLSERLWGLT EMFPKRVRSA AGATFDLSLF VAQKMYRFSR AALWIGTTSF MILVLPVVFE 180
  181 TEKLQMEQQQ QLQQRQILLG PNTGLTGGMP GALPPLPGKI

Type	Start	End	Confidence
Cytoplasmic	1	160	0.86
Transmembrane Helix	161	179	0.90
Non-Cytoplasmic	180	220	0.81