YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94397677
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTQPMTPVS FPTLGKPTHK PASDDHRQPT FKELLQSGCV TSLIPRSPSH RCDHDCYRTG  60
   61 TVYNLFFYLL TVALYPLNIG RVELDTKIPF NPKFCEGYEV IRCTGNSDKE QGVRKLFQVN 120
  121 DRVFTWMNGN KGLAFSLKHQ RPNPCLSRGG QETVRGHQAG CGCVPTPHAR TNAGSPEPYA 180
  181 PQRSISGPGH PGPRCPWLGA RRCVSARLSL PASCLGGRAG WESRASPSAQ AMVAKQRIRM 240
  241 ANEKHSKNIT QRGNVAKTLR PQEEKYPVGP WLLALFVFVV CGSAIFQIIQ SIRMGM

Type	Start	End	Confidence
Non-Cytoplasmic	1	267	0.68
Transmembrane Helix	268	289	0.93
Cytoplasmic	290	296	0.62