YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94391403
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRQVDSYH RPQPATMAAV SCTGLLLPLS LNCHQRNRPE LSLFRRTYAW STVYTSRTNG  60
   61 FPAPQLVATV ITGFPNMSCC CCHRRCRHEL LPLSCATLVH LAGLASAGPH LPTLSSMFLF 120
  121 TNCGPFRVRT KTVKKAARVI IEKYYTRLGN DFHTNKRVCE EIAIIPSKKL RNEIAGYVTH 180
  181 LMKRIQRGPV RGISIKLQEG ERERRDNYVP EVSALDQEII EVDPDTKEML KLLDFGSLSN 240
  241 LQVTQPTVGM NFKTRGAV

Type	Start	End	Confidence
Cytoplasmic	1	13	0.46
Transmembrane Helix	14	34	0.45
Non-Cytoplasmic	35	258	0.80