YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94387458
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRETSLLS FSSSRARCPK GRRPRGKKVA PAPAVVKKQE AKKVVNPLFE KRPKNFGIGQ  60
   61 DIQPKRDLTR FVKWPRYIRL QRQRAILYKR LKVPPAINQF TQALDRQTAT QLLKLAHKYR 120
  121 PETKQEKKQR LLARAEKKAA GKGDVPTKRP PVLRAGVNTV TTLVENKKAQ LVVIAHDVDP 180
  181 IELVVFLPAL CRKMGVPYCI IKGKARLGHL VHRKTCTTVA FTQVNSEDKG ALAKLVEAIR 240
  241 TNYNDRYDEI RRHWGGNVLG PKSVARIAKL EKAKAKELAT KLG

Type	Start	End	Confidence
Signal Peptide	1	16	0.64
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	283	0.99