YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94310263, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMDKTQITQ LGDALYQALT TRTVLDPLTE RHPDMTIEDA YHIQQRMIER RVQAGETIIG  60
   61 KKIGVTSAAV MNMLGVYQPD FGYMLDGMIY NEGQSIEIGT LIQPKAEGEI AFILKKDLMG 120
  121 PGVTNVDVLA ATECVMPCFE IVDSRIRDWK IKIQDTVADN ASCGVFVLGD HAVDPRKLDL 180
  181 TLCGMVMERN GEIIATGCGA AALGSPVNAV AWLANTLGRL GIALKAGEVI LSGALAAMFP 240
  241 AKAGDSFRVS IGGLGGCSVR FH

Type	Start	End	Confidence
Cytoplasmic	1	192	0.55
Transmembrane Helix	193	214	0.57
Non-Cytoplasmic	215	221	0.73
Transmembrane Helix	222	241	0.53
Cytoplasmic	242	262	0.45