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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94380599
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRAPPAPG PRPPPRAADV ARGAGAAGRH GLPPLALRPW RWLLLLALPA ACSALPPPRP  60
   61 VYTNHWAVQV LGGPGAADRV AAAHGYLNLG QIGNLDDYYH FYHSKTFKRS TLSSRGPHTF 120
  121 LRMDPQVKWL QQQEVKRRVK RQARSDSLYF NDPIWSNMWY MHCTDKNSRC RSEMNVQAAW 180
  181 KRGYTGKNVV VTILDDGIER NHPDLAPNYD SYASYDVNGN DYDPSPRYDA SNENKHGTRC 240
  241 AGEVAASANN SYCIVGIAYN AKIGGIRMLD GDVTDVVEAK SLGIRPNYID IYSASWGPDD 300
  301 DGKTVDGPGR LAKQAFEYGI KKGRQGLGSI FVWASGNGGR EGDHCSCDGY TNSIYTISVS 360
  361 STTENGHKPW YLEECASTLA TTYSSGAFYE RKIVTTDLRQ RCTDGHTGTS VSAPMVAGII 420
  421 ALALEANPFL TWRDVQHLLV KTSRPAHLKA SDWKVNGAGH KVSHLYGFGL VDAEALVLEA 480
  481 RKWTAVPSQH VCVATADKRP RSIPIVQVLR TTALTNACAD HSDQRVVYLE HVVVRISISH 540
  541 PRRGDLQIHL ISPSGTKSQL LAKRLLDFSN EGFTNWEFMT VHCWGEKAEG EWTLEVQDIP 600
  601 SQVRNPEKQG KLKEWSLILY GTAEHPYRTF SSHQSRSRML ELSVPEQEPP KAAGQPPQAE 660
  661 TPEDEEEYTA PSIQGSPNTL QTSVCHPECG DKGCDGPNAD QCLNCVHFSL GNSKTNRKCV 720
  721 SECPLGYFGD AAARRCRRCH KGCETCTGRS PAQCLSCRRG FYHHQETNTC VTLCPAGLYA 780
  781 DESQRLCLRC HPSCQKCVDE PEKCTVCKEG FSLARGSCIP DCEPGTYFDS ELVKCGECHH 840
  841 TCRTCVGPSR EECIHCAKSF HFQDWKCVPA CGEGFYPEEM PGLPHKVCRR CEENCLSCEG 900
  901 SSRNCSRCKA GFTQLGTSCI TNHTCSNADE TFCEMVKSNR LCERKLFIQF CCRTCLLAG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle