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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94378332, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHDQENDLE LLTLLSPAPV CKDVKNVRNS GSLLSSIAVQ CSKSQRAKQL LPDQGGAGSG  60
   61 ARDGTPICVL SIFVGIQGSA VFGKARKRSG WARPRSDSFG CRSPANPTVA ECLAVRAPRD 120
  121 PDPQEPRGPP IVPRGSPPRQ PPDAAEAPPP RTEASSRERP CLRVSALRTP SGRPVAPAAR 180
  181 PCVRAAAALR RGRPGTEGSS SLPAPAALVV AVAVVVVVVS AVAWAMANYI HVPPGSPEVP 240
  241 KLDVTVQDQE EQRCRDGALS LLRHLRPHWD PREVTLQLFT DGITNKLIAC YVGDTMEDVV 300
  301 LVRIYGNKTE LLVDRDEEVK SFRVLQAHGC APQLYCTFNN GLCYEFIQGE ALDPQHVCNP 360
  361 AIFRLIARQL AKIHAIHAHN GWIPKSNLWL KMGKYFSLIP TGFADENINK RFLSEIPSPQ 420
  421 LLQEEMTWMK ELLSSLGSPV VLCHNDLLCK NIIYNEKQGD VQFIDYEYSG YNYLAYDIGN 480
  481 HFNEFAGVSD VDYSLYPDRE LQGQWLRSYL EAYKEYKGFG SDVTEKEVET LFIQVNQFAL 540
  541 ASHFFWGLWA LIQAKYSTIE FDFLGYAVVR FNQYFKMKPE VTALKMPE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle