YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124486999, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPAQEAAKL YHTNYVRNSR AIGVLWAIFT ICFAIVNVVC FIQPYWIGDG VDTPQAGYFG  60
   61 LFHYCIGNGF SRELTCRGSF TDFSTLPSGA FKAASFFIGL SMMLIIACIV CFTLFFFCNT 120
  121 ATVYKICAWM QLTSAACLVL GCMIFPDGWD SDEVKRMCGE KTDKYTLGAC SVRWAYILAI 180
  181 IGILDALILS FLAFVLGNRQ DSLMAEELKA ENKDDGNA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.98
Transmembrane Helix	21	45	0.89
Non-Cytoplasmic	46	92	0.88
Transmembrane Helix	93	117	0.91
Cytoplasmic	118	125	0.74
Transmembrane Helix	126	147	0.88
Non-Cytoplasmic	148	174	0.83
Transmembrane Helix	175	196	0.95
Cytoplasmic	197	218	0.84