YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94365736
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHQLRQLEV LFMPRRLDVR NRKIFIINNI GIIINNNIIR ALLQSRILVS NQQTQEQIYV  60
   61 QPKYPWKCAP RRNKLDHYAI INFPLTTESA MKKIEDNTLV FIVDVKANKH QIKQAIKKLC 120
  121 DIDVAKVNTL IRPDGEKKAY VRLAPDYDAL DVASKIGII

Type	Start	End	Confidence
Cytoplasmic	1	23	0.64
Transmembrane Helix	24	43	0.65
Non-Cytoplasmic	44	159	0.99