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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCNB2_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKAPPGLN RKTSRSTLSL PPEPVDIIRS KTCSRRVKIN VGGLNHEVLW RTLDRLPRTR  60
   61 LGKLRDCNTH ESLLEVCDDY NLNENEYFFD RHPGAFTSIL NFYRTGKLHM MEEMCALSFG 120
  121 QELDYWGIDE IYLESCCQAR YHQKKEQMNE ELRREAETMR EREGEEFDNT CCPEKRKKLW 180
  181 DLLEKPNSSV AAKILAIVSI LFIVLSTIAL SLNTLPELQE NDEFGQPSDN RKLAHVEAVC 240
  241 IAWFTMEYLL RFLSSPNKWK FFKGPLNVID LLAILPYYVT IFLTESNKSV LQFQNVRRVV 300
  301 QIFRIMRILR ILKLARHSTG LQSLGFTLRR SYNELGLLIL FLAMGIMIFS SLVFFAEKDE 360
  361 DATKFTSIPA SFWWATITMT TVGYGDIYPK TLLGKIVGGL CCIAGVLVIA LPIPIIVNNF 420
  421 SEFYKEQKRQ EKAIKRREAL ERAKRNGSIV SMNLKDAFAR SMELIDVAVE KAGESANTKD 480
  481 SVDDNHLSPS RWKWARKALS ETSSNKSYEN KYQEVSQKDS HEHLNNTSSS SPQHLSAQKL 540
  541 EMLYNEITKT QPHSHPNPDC QEQPERPCVY EEEIEMEEVI CPQEQLAVAQ TEVIVDMKST 600
  601 SSIDSFTSCA TDFTETERSP LPPPSASHLQ MKFPTDLPGT DEHQRARAPP FLTLSRDKGP 660
  661 AAREAAVDYA PIDITVNLDA GASHGPLQPD SASDSPKSSL KGSNPLKSRS LKVNFQENRA 720
  721 SAPQTPPSTA RPLPVTTADF PLTTPQHMST ILLEEALPQG QPPLLEADDS AHCQGPSKGF 780
  781 SPRFPKQKLF PFSSRERRSF TEIDTGEDED FLDLQRSRPD KQADPSPNCL ADKPGDARDS 840
  841 LREEGCVGSS SPQNTDHNCR QDIYQAVGEV KKDSSQEGYK MENHLFAPEI HSNPGDTGHC 900
  901 PTRETSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle