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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115477737, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLSCKNLL PCCMGHPPAT SPAGATAGVS VKVSDRYVEI KNGIFELTLS NPDGIVTGVR  60
   61 YNGVDNLMEI LNKEDNRGYW DLVWSKLGER TGIFDVIKGT EFRIIYQDEN HAEVSFVRTW 120
  121 DPSLEGKAVP LNIDKRFIVL RGCSGFYTYG IYEHQEGWPG FSLGETRVAF KLRKDKFHYM 180
  181 ALADDRQRIM PMPEDRVPPR GQQLAYPEAV LLVDPINPDL RGEVDDKYQY SCEDQYNNVH 240
  241 GWISFDPPIG FWQITPSDEF RTGGPVKQNL TSHVGPTMLA MFLSGHYAGD DLTPKFLTGE 300
  301 YWKKVHGPVF MYLNSSWDGS DPTLLWEDAK VQMMIEKESW PYCFALSDDF QKTEQRGCIS 360
  361 GRLLVRDRYL DDADLYATSA YVGLALPGDV GSWQRECKGY QFWCRAEDDG SFCIRNIVAG 420
  421 DYNLYAWVPG FIGDYKLDAK LTISSGDDIY LGDLVYEPPR DGPTMWEIGI PDRSASEFFV 480
  481 PDPNPNYVNR LYINHPDRFR QYGLWERYAE LYPDGDLVYT IGQSDYTTDW FFAQVNRRTD 540
  541 QSTYQPTTWQ IKFNLDSVSP NSTYKFRVAL ASSANAELQV RFNDQDRTAP HFTTGLIGKD 600
  601 NTIARHGIHG LYWLFNIDVS GAWLVQGMNT IYLKQPRNQS PFQGLMYDYL RMEGPSGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle