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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114145377
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKKITGLLL AFLLLFSSVA FGAGTSQQLS TKNIQQVSVQ KQQKIDYSQK LKESADPNEK  60
   61 VRIIVELKDA PTINYAKKQG VKYSELKETT KQKLEKDVLA KQGQVKEEIK SKNIKIKYFH 120
  121 QFATVFNGFS AEVKYNDISK IEKLSNVKKV HIANKYERPK VKPEMKYSKE LVEAQKAWEA 180
  181 TGYKGEGMVV GIIDTGIDYN HKDMVLTDTS NEKLTKEKVE EITKANNLPG KFYTDKVPYG 240
  241 YNYMDKNDEI RDLGSGASMH GMHVAGTVGA NGDENNGGIQ GVAPEAQLLA LKVFGNDPEM 300
  301 PFTFGDVYVK AIDDAIKLGA DVLNMSLGST AGFVSADDPE QQAVKRAVDN GVLMSISAGN 360
  361 SAYFGNGYYT SPLVFADNPD YGVSGSPGLS YESIQVASYE NSFMDVDALQ YDINNGEDTG 420
  421 KAAFLSASQV HPNEYVQKTF EVVAAGLGQP EDFEGKDFKG KYALVQRGAI PFVEKALNAQ 480
  481 DAGAEGVIIY NNTDGIVNMA TDRAIEIPQL FMMKADGEKL RAALDSGKTV KITFTGDKQK 540
  541 IDNPSAGKMS DFTSWGLAPN LDFKPEITAP GGQILSTLNN NQYGIMSGTS MAAPHVSGGA 600
  601 ALVLERVDKD FQLKNADRVL MAKNLLMNTA KPVQQNGVFV SPRRQGAGLM QLNAALSTPV 660
  661 IVTEEKTKEA KVALKEITEN QVTFKLSAQN FTDQNVTYNV TANVQTDKPA DAGGLYVAVP 720
  721 NQLGALDLVQ SKLAKVTVNG EPTKEIEVPA HGTATIEVTI DVSEGDADLS QIFKNGYWLE 780
  781 GFVTLTDTED KNPTLTVPYV GFKGKWDQAP IVDAPAWDEN SFYGMTGVAS SIGEGFYGFL 840
  841 GYDWATETID PEKIAFSPNG DGINDDALVV LSFLRNAKEV KFKVLDENKK PIRTLRTEYF 900
  901 VRKNYYDGGE ELGYSLVGDR AWDGKINGKA AQEGKYYLQV AAVIDYPDAK WQTFEFPVKL 960
  961 DVTEPTVEAS FDKDTQTISI NNLSDGENGS GVAYWDVLVD GQSVLKDAPL LPAQTTYQLK1020
 1021 KTLRPDQELV VEVYDYAGNK AVQVLNEGEN GNIPDLHVME PQTTQMVNSN EVTFYGYVED1080
 1081 KSGIQSITVD GEEVDMVYSD DGYGYYEFEK TITLDDGVHD IQVTAINNKG AKAEVSRTIM1140
 1141 VDTTAPELTV NDVKEYVGEN TQTLPVSLNV KDNFDDIRVY VNGEEKFYHA FREPYEMRPF1200
 1201 EQTIEVDLPL EQGENTFELK VVDLAGNETV QEITVHRQKL VGWVKQGDDW YYYNENEEMQ1260
 1261 TGWIEVDGKQ YYLGEDGVKR TGWIEVDGNQ YYLGEDGVKR TGWIEVDGNQ YYLGEDGVMQ1320
 1321 TGWVEVDGNR YYLGEDGVKR TGWVKDGGKW YYLNDKGVMQ TGWVKDGGKW YYLSTSGVMQ1380
 1381 TGWVKDGGKW YYLNANGVMQ TGWVKDGGKW YYLNDKGVMQ TGWVKDGGKW YYLNDKGVMQ1440
 1441 TGWVKDGGKW YYLNANGVMQ TGWVKDGGKW YYLNGSGVMQ TGWVKDGGKW YYLNGSGVMQ1500
 1501 TGWVKDGGKW YYLNANGVMQ TGWVYIGNKQ YFFDANGVWV K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle