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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115489244, gi...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRSMIRLWVV ATWLIVCAAA HPGEQPLSRI AVERTVLAVN ESAHVKASPW VLGLKGQNSE  60
   61 WVEVEFFHPS PSNDDWIGVF SPANFSAAIC EPENKRQRPP VLCTAPIKYQ FANFNNDGYN 120
  121 KSGKGYLKLQ LINQREDFSF ALFSGGLLKP KLIAVSNKVA FANPKAPVYP RLAQGKSWNE 180
  181 MTVTWTSGYD IKEAVPFVEW GAKGGRSFLS PAGTLTFDRN SMCGAPARTV GWRHPGYIHT 240
  241 SYLKDLWPDS LYTYRLGHRL PNSTLIWSKS YSFKASPYPG QDSLQRVVIF GDMGKAEADG 300
  301 SNEFNDFQPG SLNTTYQIIR DLENIDMVVH IGDICYANGY LSQWDQFTAQ IEPIASTVPY 360
  361 MIGSGNHERD WPGTGSFYGN LDSGGECGVP AQTVFYTPAE NRAKFWYATD YGMFRFCIAH 420
  421 TEEDWRPGTE QYKFIEQCLS SVDRQKQPWL IFLAHRVLGY SSCSYYEEQG TFGEPMGRDT 480
  481 IEELLQKYRV DLAFYGHVHS YERTCPVYQG QCVVNASDHY NGPFKATTHV VVGGGGASLS 540
  541 EFTTSKIKWS HYTDFDFGFV KLTAFNHSSM LFEYKKSRDG NVYDHFTISR DYRDILACSV 600
  601 DNCPRTTLAT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle