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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115488988, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRGAASLG RTLAGFLAHE DPAKVLSLFA DKARQHGGLG PLDFACALRA CRGNGRRWQV  60
   61 VPEIHAKAVT RGLGKYRIVG NLLIDLYSKN GLVLPARRVF EELSARDNVS WVAMLSGYAQ 120
  121 NGLGEEALGL YRQMHRAGVV PTPYVLSSVL SSCTKAELFA QGRLIHAQGY KHGFCSEIFV 180
  181 GNAVITLYLR CGSFRLAERV FCDMPHRDTV TFNTLISGHA QCGHGEHALE IFEEMQFSGL 240
  241 SPDCVTISSL LAACASLGDL QKGTQLHSYL FKAGISSDYI MEGSLLDLYV KCGDVETALV 300
  301 IFNSSDRTNV VLWNLMLVAF GQINDLAKSF ELFCQMQAAG IRPNQFTYPC ILRTCTCTRE 360
  361 IDLGEQIHSL SVKTGFESDM YVSGVLIDMY SKYGWLEKAR RVLEMLKEKD VVSWTSMIAG 420
  421 YVQHECCKDA LAAFKEMQKC GIWPDNIGLA SAISGCAGIN AMRQGLQIHA RIYVSGYSGD 480
  481 VSIWNALVNL YARCGRIREA FSSFEEIEHK DEITWNGLVS GFAQSGLHEE ALKVFMRMDQ 540
  541 SGVKHNVFTF VSALSASANL AEIKQGKQIH ARVIKTGHSF ETEVGNALIS LYGKCGSFED 600
  601 AKMEFSEMSE RNEVSWNTII TSCSQHGRGL EALDLFDQMK KEGIKPNDVT FIGVLAACSH 660
  661 VGLVEEGLSY FKSMSDEYGI RPRPDHYACV IDIFGRAGQL DRAKKFIEEM PIAADAMVWR 720
  721 TLLSACKVHK NIEVGEFAAK HLLELEPHDS ASYVLLSNAY AVTEKWANRD QVRKMMRDRG 780
  781 VRKEPGRSWI EVKNVVHAFF VGDRLHPLAE QIYNFLAVIN DRVAKVGYKQ EKYHLFHDKE 840
  841 QEGRDPTDLV HSEKLAVTFG LMSLPPCMPL RVIKNLRVEK YTSLYANFLH QKRTNGQVGQ 900
  901 IEKTERKERA GGMKGKQLET PISHLKSGAR RNILKPASAA AAVMELTCPN QKMAYQQGIR 960
  961 CLLEREAGAY FVCFQRNSRE YVGCHAIRCW ATWRKETRTL SPRSSPYDRE IHLEELPPRG1020
 1021 LQCIASLLVT FQEYSGMETY ERDWRPGLNF RFSRFDRSDG NDSSIRELTG QMLQDMKYSY1080
 1081 RSILVYVLLL YDKTNDDQLL KHLKREIIHG MQQSCRDPEM GREMDEVAAM FCSKQGKPVG1140
 1141 NYASLVKEAR ERLVVKKKEQ ESATNVSATS SSMAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle