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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115488714, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSARPPPPPR PRLALPPRSA AESLFTGAGD ASPGPLTLAS ALFPSDPDGG GGGGGVMTSS  60
   61 SSSAAGATSF TQLLIGNLSA PPPPPPPPQQ QQQREAARGG GVARAGPALS VAPPPTAGSV 120
  121 FTVPPGLSPS GLLDSPGLLF SPAMFDAFDV LDMFIPDKIL PKRATRIKLD IYFVKTSPEG 180
  181 GFGMSHREAL AQVTAQASHS PLRMFDHTEQ PSFSAAPTSS EAMQHMNAAV NMTGISDMVM 240
  241 GPTNNENVAF QPAEASQRYQ VNAPVDKPAD DGYNWRKYGQ KVVKGSDCPR SYYKCTHPNC 300
  301 PVKKKVEHAE DGQISEIIYK GKHNHQRPPN KRAKDGSSSA ADQNEQSNDT VSGLSGIKRD 360
  361 QEAIYGMSEQ LSGLSEGDDM DDGESRPHEA DDKESDSKKR NIQISSQRTS AEAKIIVQTT 420
  421 SEVDLLDDGY RWRKYGQKVV KGNPHPRSYY KCTYAGCNVR KHIERASSDP KAVITTYEGK 480
  481 HNHEPPVGRG NNQNAGNAAP SSSAQQNMQN LSKANWGLTV QKRRITPSTD FLGTPVAEVA 540
  541 HWQILDACNS NSHTVPNVQE IDLLHGKLTV VPASVPFLAI LICRICSCSE QLLSFLTPPL 600
  601 YEVSIINYYD LISLQVNHIM PCAYQYHIPF YRRSVTTRAS GQAGVWIKER ST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle