YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115485843, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSLLSSAA SGLPPKPQPP SSTPPSSASA RPRGFRRFML ARAAAGRDPE PPPLPEGTEK  60
   61 RSLAVRTGEV FLGLAALLVR AGRGGGAAVE EVEAKDGVVW EQRPEDVEAE RRRRELTGPG 120
  121 FSFSAAGLLF PYHIGVAQCL IDRGYLTERT PLAGSSAGAI ICAVIASGNT MRDALQVTKD 180
  181 LADNCRSNGT AFRLGAVLKD VLDRFLPDDV HIRCNGRIRV AITQLSWRPR GLLVDQFDSK 240
  241 DDVISAVITS SFIPGYLAPR PATFFRNRLC IDGGLTLFMP PTSASETVRI CAFPASRLGL 300
  301 QGIGISPDCN PENRASPRQL FNWALEPAED EVLDKLYELG YLDAAVWADQ NQVELIVKNE 360
  361 QPLRVTD

Type	Start	End	Confidence
Signal Peptide	1	22	0.43
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	367	0.70