YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215706480, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKPTRAVDH RRRRSGRAPA IAAVAVAAED DGEEHHLNPF LDAAPSSSSS RVQFRKVASR  60
   61 AVWLEEAGAA EVVDSKGKLW LTTGVNRDGK LYYNVEEIGF LAERGALVLL DYEGETIGME 120
  121 EIYGKIAGGK YGCSWDAFQA YKHLKLLGYI IGRYGVPWTV KRSHTYSVTD ASTSVVETDQ 180
  181 IQSLNRVGGA SNDITKLLKE MCIDDMHPSF EVYLPNSKFK KTSPGDPSFV LCLLSNKPPS 240
  241 REELETVENK FEGIPLKFCH VDNGRVSFLS SNKAALPSLP

Type	Start	End	Confidence
Signal Peptide	1	28	0.81
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	280	0.99