YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113610358, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIALSFLLH ILLFHGFNLV LAVSASDDQF VFSGFSGANV TLDGTATVTA GGLLELTNGT  60
   61 TQLKGHAFFP APLSFRGSLN GTVQSFSASF VFAILTSYPN LSCHGIAFVV APSNNLSTAL 120
  121 AAQYMGLTNI DNNGNASNHI FAAEIDTMQN VEFQDINNNH IGVDINGLHS VESHYAGYYD 180
  181 KNGSFHNMNL ISGDVMQAWV DYDGDIAQIN ITIGPIDMSK PGRSLISTTY NLSDVLMEPS 240
  241 FIGFSSATGP INSRHYILGW SFGMNKPAPN IDIAKLPKLP RLAPKPQSKV LVILLPIAIA 300
  301 AFILSVGIAM VFLVRRRQRY AELREDWEDE FGPHRFAYKD LLHATDGFSD KHILGAGGFG 360
  361 RVYKGILPKS KLEVAVKRVS HESRQGMKEF VAEVASIGRI RHRNLVQLLG YCRRKGELLL 420
  421 VYDYMSNGSL DRYLHYEGNK PVLDWVQKFQ IIKDVASGLL YLHEKWDKVV IHRDIKASNV 480
  481 LLDKEMNARL GDFGLARLYD HGTDAHTTHM VGTMGYLAPE LIHTGKASTL TDVFAFGTFL 540
  541 LEVICGQRPI KEDAHGNQIL LVDWVLEHWH NESLLDTVDP RLQGDYNVEE ACLVLKLGLL 600
  601 CSHPSTNARP CMQQVVDYLE GDTPVPELAS THRNFNELAS MRKKGFDPYI MSYNPSSTGS 660
  661 DLKFRLSEME LQLIVIGGSI VDGQIYHPLQ L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle