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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113578737, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGTLLRGGNH VGLTGGSQEG ERRPRQCSSS FRQYCVHPCV RVIRVSLWRC WLVGWLQESI  60
   61 PIQEVFAVLK SSPQGLTSAD GNGRLEIFGR NKLEEKKESK LLKFLGFMWN PLSWVMEAAA 120
  121 IMAIALANGG GRPPDWQDFV GIVTLLFINS TISFIEENNA GNAAAALMAS LAPQTKLLRD 180
  181 GKWSEQDAAI LVPGDIISIK LGDIIPADAR LMEGDPLKID QSALTGESLP VNKMPGDSIY 240
  241 SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTAIGNFC ICSIAAGMLI 300
  301 EIIVMYPIQH RQYRDGIDNL LVLLIGGIPI AMPTVLSVTM AIGSHRLSQQ GAITKRMTAI 360
  361 EEMAGMDVLC SDKTGTLTLN KLTVDKNMIE PFVKDLDKDA IVLYAARASR TENQDAIDAS 420
  421 IVGMLADPSE ARAGIQEVHF MPFNPVDKRT AITYIDTKDG SWHRISKGAP EQIIELCRLR 480
  481 DDVSRRVHAI IDKFADRGLR SLAVARQKVP EGSKDAPGTP WQFLAVLPLF DPPRHDSSET 540
  541 IRRALNLGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSS LLKDGDTGGL PVDELIEKAD 600
  601 GFAGVFPEHK YEIVRRLQER KHICGMTGDG VNDAPALKKA DIGIAVADAT DAARGASDIV 660
  661 LTEPGLSVII SAVLTSRAIF QRMKNYTIYA VSITIRVVLG FLLLALIWRF DFAPFMVLII 720
  721 AILNDGTIMT ISKDRVKPSP LPDAWRLQEI FATGIVLGTY LALATVLFFW AVRDTDFFTV 780
  781 TTHHPTSHAS PPRALTPCVC GQRTFGVHPI GGSTEELMAA VYLQVSIISQ ALIFVTRARS 840
  841 WFFVERPGLL LVGAFLIAQL MATLIAVYAN WPFAKMKGIG WSWGMVIWLF SIVTFFPLDI 900
  901 FKFAIRYFLS GKAWNNAFDN KTAFANELDY GKSKREAQWA IAQRSLHGLQ QAETSTALFD 960
  961 DNKDYLELSE IAEQAKRRAE IARLRELHTL KGHVESVVKL KGLDIDTIQN HYTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle