YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113565535, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPPTCRSPPP RRRDGTIYTS PPPNLLLLLL LLLAVAAASG RARVSGRYSD RLPFDLDRQK  60
   61 LRSFTTLAAI TITLIFAWKL LRAPQEQPRR PRRRVAPSPS NTSSRSRPGA LTSTDACSSS 120
  121 ADSRAQEAIN QLFQPVNLTL EQLVRHKLSE GRRVTCRLLG VILEETTPEE LQNHVTVRPS 180
  181 VLEVLLEIAK FCDVYLMERI LDDESGEKVL SALSEAGLFT NSGLIKDKVL FCSTENGRTS 240
  241 FVRQLEPDWH IDTSPEIVHQ LARFIKYQLH ISPQRAERVA SNVFSSTSLE QFFGGLDQR

Type	Start	End	Confidence
Non-Cytoplasmic	1	24	0.75
Transmembrane Helix	25	44	0.89
Cytoplasmic	45	60	0.79
Transmembrane Helix	61	81	0.90
Non-Cytoplasmic	82	299	0.82