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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115459110, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAGDPVAA AAVAAASSSA GAAAASFRLG MVRVVSFLVG GLNVAVLLLG LYLIDGVLPP  60
   61 GCGGGLALAA APALAGIRVL AMIGTARAQH ATADAIARRH LDEAAASVAA DAVARHEIRV 120
  121 RYKRWLWWTR FGMAVGAMQL VGAIYLMLVI VRDISNERRA TSCFFGQDEA DHVSKRALIA 180
  181 LFLILSWVVV VVQCFTGSDI LRWRSFYATH DMAWKAHYRE VFDHGIREAL CCLGRAKYLT 240
  241 VLEEDEVYSV ARLLGDLVAY RASGTGHLEL LAGLALLQKN ENLPHLQTDL TEAPLNLMQE 300
  301 AAILHPFAEA CYTGPLLDVG RNPILFPCAW VYRQGVLTPW SRRRRPALDG DNWWRGHAAA 360
  361 FLRFVHIPAA ALLRGRVCQS KREAAYFVVV LHDKKTVVIG VRGTETPEDL ITDGLCRECA 420
  421 FTMEDLDGLV KCEQLPATTR ERVISTFPHY GHGGILESAR ELFMQLNDCT GDNSSSLTVG 480
  481 FLPALVGEGS ECHGYKIRVV GHSLGGSVAT VLGMMLFGRY PNVHVYAYGP LPCVDFVIAE 540
  541 ACSQFVTTIV CNDEFSSRLS INSILRLRSA AIRALSDNSP ADTAMIQKLA RRILNVNKYH 600
  601 DNGPDGGIME DYSARHHTFE GRAVSTERRF PHQDAPCTSE PDLPILQNGI NGYNGSNSSI 660
  661 DVMSSQGLHT DCDAQTISLH GLDSGSEQRH TSYRDIPVEP PEMFLPGLVV HIERQRRSLF 720
  721 PLWKCWSLQG SEPPYKAFFA KRENFTDLAV TPSMFTDHLP WRCHYAMQRV LEAQTAASCP 780
  781 DSPVERLV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle