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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113563909, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHSTSLLRL IFLALGAALV VLVVRSAFRL PGDIDTTTTS LFDDGNGGSC TRFSPWACRQ  60
   61 GRGDPRSNPS NPRRPSHESD VPRHPLDPLT VREVNRVREL LRAHPLFASA PSSLFVHSLE 120
  121 LDEPEKSVVK SWRKGADPLP PRRAVAVVRF RGESHVLGVD LSEGDGAVTP LPVPASGYPM 180
  181 MNMDEQTSLC FAPFKDEAFN ASLLRRGVRA SDVACLPISL GWYGPAEENR RLIKSQCFST 240
  241 EGTANFYMRP IEGLTVLVDM DTAEVLHVSD RGAGIPIPAA ANTDYRHGHS APTPAEAQAQ 300
  301 GRHGYQTVRV PSMEPPAGGP GFELVDGHTV RWGGWEFHLK PDARAGMVVS RARVQDPATG 360
  361 EHRDVMYKGM ASELFVPYMD PTEAWYFKTY MDAGEYGFGL QAMPLVPLND CPRHARYLDA 420
  421 VFVAADGRPY VRENMICVFE RYAGDIAWRH SESPITGMDI RESRPKVTLV ARMAASVANY 480
  481 DYIVDWEFQM DGLVRIKVGL SGILMVKGTQ YSHMNQVHQN DNMYGTLLSE NVIGVIHDHF 540
  541 VTFRLDMDID GADNSFVKVA MARQNTGAGE SPRKSYLKAT RHVARTEKDA QVRLKLYEPS 600
  601 EFHIVNPMKK TRVGNPVGYK VVPAGTAASL LDPEDPPQKR GAFTNNQIWV TPYNKTEEWA 660
  661 GGLFVYQSKG EDTLATWSER DRPIENKDLV LWYTLGFHHV PCQEDFPIMP TVSSSFDLKP 720
  721 VNFFESNPIL GQRPTQENDL PVCAAAATTS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle