YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113535560, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAATAAGAF GFGRTRADME PSSQPQPVMG VATGGSQAYP PPAAAYPPQA MVPGAPAVVP  60
   61 PGSQPSAPFP TNPAQLSAQH QLVYQQAQQF HQQLQQQQQQ QLREFWANQM EEIEQTTDFK 120
  121 NHSLPLARIK KIMKADEDVR MISAEAPVVF AKACEVFILE LTLRSWMHTE ENKRRTLQKN 180
  181 DIAAAITRTD IYDFLVDIVP RDEMKEEGLG LPRVGLPPNV GGAADTYPYY YVPAQQGPGS 240
  241 GMMYGGQQGH PVTYVWQQPQ EQQEEAPEEQ HSLPESS

Type	Start	End	Confidence
Signal Peptide	1	17	0.79
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	277	0.99