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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113533050, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMDALHRLC LLVCVLIGAG CSQSPRHQRL PATTTTTAGN VQRRPPGVAG ALGSPLIGHD  60
   61 GRLIACSEKK SLVAFERNGS IAWMVTLGHT CKEGISPVAE RDEIYLVAED NKVIKITPKK 120
  121 LHTADPPSEV FFSYNATPGR SEEIIGLSIS GSSSSLFLTI RNRGLFAFSL HAELQWSAGP 180
  181 VADLVSRLGC KTNISGCYFN SPPVVDRCEG TLYVSNTEGQ LYSLYIKSGQ YRWIQDLGSL 240
  241 DKVMNIVPGN NGLLYIVLPR KSIVMGLDVL TGNISWQQTI GPLSNEKILP PVDSNVVFGF 300
  301 GLMCVLISGC IHLHIHSITN TCWISVGSLD GTLYSISPNG DIRRFPERTT PGSVIHASPV 360
  361 LDCSGFSVYV SQTIMEAKSN QTIGDSTSLS VMKSSSTLLT LLTPANGTIH WTGNYPGELS 420
  421 DFLSSTDLND FALDETIVLR LFSAARIGST TQCYTRSMFL FSGDRNIRLV LFFHFIVIVI 480
  481 AIVNCFCCIF WRKKKLQKNG LKKFLEKRHS LHTKRKILGK RISELEQKTV HDASSNEALG 540
  541 QLGETVNAKE CIERKLCSSY SLGRDMLGLK HDSILPLNST KYKSHSFRNS REESITVFNT 600
  601 FSGTSSSENG TSSCSGESES CSDCSYGDEM LGTNFQSAAQ EAGPSNYADR ADQVFQDECV 660
  661 SDIKSTNPHK EEYLMEAMHD KAPSKRMYLK RRRTFPSSKQ NI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle