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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113374057
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKGINLEE IKNETVDLER IPVEEVFEQL KCSREGLSGE EGASRLQIFG PNKLEEKKES  60
   61 KFLKFLGFMW NPLSWVMEMA AIMAIALANG DGRPPDWQDF VGIIVLLVIN STISFIEENN 120
  121 AGNAAAALMA GLAPKTKVLR DGQWSEEEAA ILVPGDIVSI KLGDIVPADA RLLEGDPLKI 180
  181 DQSALTGESL PVTKHPGDEV FSGSTCKQGE IDAVVIATGV HTFFGKAAHL VDSTNQVGHF 240
  241 QKVLTAIGNF CICSIAIGMV IEIIVMYPIQ GRKYRDGIDN LLVLLIGGIP IAMPTVLSVT 300
  301 MAIGSHRLSE QGAITKRMTA IEEMAGMDVL CSDKTGTLTL NKLSIDKNLI EVFCKGVDKE 360
  361 HVVLLAARAS RVENQDAIDA AMVGMLADPK EARSGIKEVH FLPFNPVDKR TALTYVDADG 420
  421 NWHRVSKGAP EQIMDLCNCK EDVKRKAHNV IDKFAERGLR SLAVGRQGVP EKSKESSGGP 480
  481 WQFVGVMPLF DPPRHDSAET IRRALNLGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSS 540
  541 LLGQDKDSSI ASLPVDESIE KADGFAGVFP EHKYEIVKRL QERKHICGMT GDGVNDAPAL 600
  601 KKADIGIAVA DATDAARSAS DIVLTEPGLS VIISAVLTSR AIFQRMKNYT IYAVSITIRI 660
  661 VLGFLLIALI WKFDFSPFMV LIIAILNDGT IMTISKDRVK PSPLPDSWKL KEIFATGVVL 720
  721 GSYMAIMTVI FFWIMRETDF FSDKFGVRSL RPPTNKNDPD YNDKRDEMMA ALYLQVSIIS 780
  781 QALIFVTRSR SWSFVERPGF LLLIAFCIAQ LVATLIATYA NWGFAKIKGI GWGWAGVIWL 840
  841 YSIVTFLPLD VLKFAIRYIL SGKAWNNLID NKTAFTTKKD YGREEREAQW ATAQRTLHGL 900
  901 QTNESQTLFA DTRNYRELSE IAEQAKRRAE VARLRELNTL KGHVESVVKL KGLDIDTIQQ 960
  961 HYTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle