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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|93003094, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISATQPLSR DVAVPLSDAE REKRREEEPK KQSREEWRKK KELEEARKLG NAPAEVDEEG  60
   61 KDINPHIPQY ISTVPWYVDP SQRASLKHQR CQPEKQVEFN KMNDWYRRGV ADKPIATKFR 120
  121 KGACANCGAM THKKRDCLER PRRVGAKYTG EGIAPDEHLQ PDLNLDFDGK RDRWNGYNPN 180
  181 QHKEVIEEYK KIEIAKQTVK AKKLQEELIS GKMEEGGSDD EDKYADAASM PGTNFDSKQR 240
  241 ITVRNLRIRE DTAKYLRNLN PNSAYYDPKT RSMRENPYEG SGKAAAEGDF AGDNFVRHTG 300
  301 DTHAMARTQM FAWEAGDRGV EVHLQADPTR LEMLQKSFHV RKDEFKKDEQ QSILAKYGGL 360
  361 EHLDAPPKEL LLAQTEDYVE YSRQGNVIKG QEKAKTKSKY IEDVYVNNHT HVWGSYWQAG 420
  421 VWGYACCHST VKQSYCTGEA GKATKKIEIP LTTNNENKKE TKLEKLEKKH SAWTKALGIE 480
  481 HKVQEDGGGG SEGDGGDRGD DMEGEEGTSG EEDQPKSLLQ VSVMIVVGLS LRSSQLFYIH 540
  541 PSLSFIMFCS FCVYLVTLGL LYGLFTAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle