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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|112419469
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNEDRLRHF LNEVTSELID TRQRLNDVTA AAEEPLAIVG MACQYPGDVR SPEDLWKLVA  60
   61 EGRDGISEFP TERGWDVDGL YHPDPEHQGT SYTREGGFLH RAGEFDAGFF GISPREALAM 120
  121 DPQQRLLLET SWEAIESAGI DPLSLKGSST GVFTGVMYHD YSTQLRTVPD GVEAFLGTGN 180
  181 AGSVVSGRIA YVLGAEGPAV TIDTACSSSL VALHLACQAL RQGDCTMALA GGVTVMATPG 240
  241 TFVDFSRQRG LAVDGRCKSF AAAADGTGWA EGVGVLVVER LSDAERLGHP ILAVVRSSAV 300
  301 NQDGASNGLT APNGPSQERV IRQALSAAGL STADVDAVEA HGTGTNLGDP IEAQALLATY 360
  361 GQGRPEGRPL RLGSLKSNIG HTQAAAGVAG VIKMVMALRH GVLPATLHVD EPTPHVDWAS 420
  421 GAVELLTEAM PWPEVGRPRR AAVSSFGISG TNAHIVVEQA PESQIEVAAS REETPAGSVA 480
  481 WVVSGHGVDG VQAQAARLRE WVLEHPQHSV TDIGFSLLSS RSLHRDRLVV LGSDRQVLVD 540
  541 GLAAAAEGSP WPGLVQSSGD VSLNRAVFVF PGQGSQWVGM GRELYASSPV FRARLDECAA 600
  601 ALDPLVEWSL IDVVRGGSGA PGLERVDVVQ PVLWAVMVSL AAVWESWGVV PAAVVGHSQG 660
  661 EIAAACVAGA LSVEDAARVV ALRSRAVRAM AGDGAMVSVA LPAAEAEALT GDGVSLAAVN 720
  721 GPSSVVLSGD RSALTPVVEG LTAQGVRTKW VPVDYASHSA HMDRIHDELL EILSGIEPKT 780
  781 SRIPLYSTVS AEVIDTSVMD AGYWFDNIRG TVRFHETVQA LITDGLTAFV EISPHPVLAM 840
  841 SVQDTLDQAE ATGLSIGTLR RDENEHETFL TAAAQLFVAG LSIDWHTAAF ADLDTRRVDL 900
  901 PTYAFQRDHY WLPAGGGQTG DAGSLGLGAV GHPLLGAAVS MAEGDVVVLT GRVSLRTHAW 960
  961 LADHAVLGSV LLPGTAFLEL AVRAGDQVGC ARVEELVIQA PLVLTGDEAV DVQVMVGADE1020
 1021 SGYRSVDIYS RHRVEDNWQD QDAWVHHATG TLTSSKTDAQ NSDLSVWPPR DAASIEVEDF1080
 1081 YAQLAAGGFA YGPAFRGLRA AWRRGDEVFA EVELPESEQD TAAEFGLHPA LLDAALHAIT1140
 1141 FAAHGDFADQ PAQGRLPFSW SGVSLEASGA SLLRVHLRPA GDEAVSLLAA DATGEPVLTV1200
 1201 DSLVLRPVTS EQLRTGDSGV VDNLYTVQWG PFAGPVGVSG RDVGEWAVLD LPELGGGVGA1260
 1261 VVEGLVACDV AVRVVGRECF AGGGSLPETL IVPVVGGGGD AVDVVCGVLG VVREWLGLVG1320
 1321 GVSRLVVVTW GAVSVGSGEG VGDVGGAGVW GLLRSAQSEH PGRFVLVDVE GVEGVGWGGL1380
 1381 VDGVVCGEGQ VVVRGGGLLV PRLVRAGGGG LVIPETFTGG AEVVGGVGSG WCVGVGVGSG1440
 1441 VGTLEGLGVV GAGVGSGVGG GLGVGEVRVA VRAAGVNFRD VLIGLGVYPG EALLGSEGAG1500
 1501 VVVGVGEGVV NVGVGDRVMG LFLGGFGPEV VVDARMVVRL PVGWSFVEGA TVPVVFLTAW1560
 1561 YGLVDLAGVR AGERLLVHAA AGGVGMAAVQ LARHWGVEVF GTASEGKWEV LRGLGLDDAH1620
 1621 IASSRDLGFV EKFGREHSDG VSEGRSGGVD VVLNSLVGEF VDGSLGLLGE GGRFVEMGKL1680
 1681 DVRDAGVVGE LWSGVWYRNF DLVEAGLDRI QEMLCELVGL FDVGVLEALP VRCWDVREVV1740
 1741 DALRFVQQAR HVGKVVLRVP GGWGSGTVVV SGGTGVLGRA VVRYLVGCGV GRLLLLSRSG1800
 1801 AAGEGVAGLV GELEGLGVVV DVVACDVGDR EALAGVLGGV SGEFPVTGVV HLAGVLDDGM1860
 1861 VGSLSEGQVR RVFAGKVDGL VNLDVLTRGM PVEGFVVFSS AAGVFGNAGQ GNYAAANACV1920
 1921 DAVVARRRVE GLPGVSLAWG LWSEASGMTG HLDAGDHGRM SRGGAGGLST GEGVALLDAA1980
 1981 LGLPQSLLVP IRLDGRQLQA RADVGDVHPL LRGLVRSRSR RAASAVGIGV GGLGGRLVGL2040
 2041 VEGERRRVVL DLVRSHAATV LGHGDVAGVG AGRAFRELGF DSLTAVELRN RLNTATGVRL2100
 2101 PATLVFDYPT PTELADYLLV QMVGESGAAD SVQVPISVSS EEPLAVVGMA CRFPGGVGSP2160
 2161 DELWDFVLAG GDGISGLPVD RGWDVAGLFD PDPEREGTSY TREGGFLHDA AEFDPGFFGI2220
 2221 SPREALAMDP QQRLLLEASW EAVENAGIDP LSLKGTSTGV FAGVTYHDHA ARLRTVPDGL2280
 2281 EGLLGIGASA SIVSGRVAYL LGLEGPALTV DTACSSSLVA LHLAGQALRQ GECSMALAGG2340
 2341 VTVMSTPGTF VDFSRQRGLA ADGRCKAFDV SADGFGPAEG VGMLVLERLS DAQRLGHPVL2400
 2401 AVIRGSAVNQ DGASNGLTAP NGPSQQRVIR QALAAADLSP ADVDVVEAHG TGTALGDPIE2460
 2461 AQALLATYGQ DRPEDRPLRL GSIKSNIGHT QAAAGVAGVI KMVLAMQHGV LPATLHVNEP2520
 2521 TPHVDWASGA VELLTEATAW PETGKPRRAA VSSFGISGTN AHTIIEQAPA VDRVSDVPDA2580
 2581 DSASGVTVPW VVSARGVDGL RSQAARLREW ALKHPEHSLV DVGHSLVVSR SAFEDRVVVL2640
 2641 GSDRDALLDG LAAAAQGGPW PGVVQGSSVG SGGGVAFLFT GQGAQRLGMG RELAERFPVF2700
 2701 ASALDEVCVQ LDAHLERPLR EVLFAEPDTE AAALLDETAF TQAALFAVEV ALYRLVESWS2760
 2761 LTPDYLLGHS IGGLAAAYVA GVLSLEDAAE VVVARGRLMQ ALPKGGAMVS LQAAEDEVVE2820
 2821 SLGGLVSIAA VNGPQAVVIS GDEDAVTAVA DEWRSRGRKV KRLTVSHAFH SALMEPMLAT2880
 2881 FEQVLSGVTL NPPRIPVISD STGLPLTAEQ ATSPAYWTAH VRNPVLFHQA ITHLTGQGVN2940
 2941 SFLELGPDGV LSAMTRTSLA EDSDTTVVPL LRSGRQEPEA ALTALAELYV NGVAVDWTVL3000
 3001 LDGARPVALP TYAFQHQRFW LETGTEIPAE AATEPGDSVF WRAVEQGDAG ELASAFAAVG3060
 3061 VDASAVEWES VLPALSSWRQ AQRVRSVADS WRYRVTWKPR AGRQSSTLTG TWLVVAPAED3120
 3121 LELVDQSVAA LEAHGASVIV LRPTEGSDCG DRHMWAESLR RVVPSDEVDS LAGVVSLVGD3180
 3181 VAGTLGLVQG LGGVGVVAPL WCVTRGAVGV GGGDVVVSPV QGLVWGLGRV VGLEHPERWG3240
 3241 GVVDLPVSVD GRGWERFCSV LAGGGGEDQV AVRSSGVFVR RLVPAPAPAP APAAVSVGEG3300
 3301 GWSPGGGTVL VTGGTGVMGA RAARWLAARG AERLLLVSRA GETAPGVSEL VAELTAMGSR3360
 3361 AEVVACDVAD RDALAALLTA VPEEYPLTAV VHTAHHHDDE PLASMSAERY LPVLDAKWVG3420
 3421 AWNLHELTKD LPLSAFVLFS SGAGVWGGGG QGAYAAANAG LDALAEYRQG LGLPATAIAW3480
 3481 GPWQYQQDSS AVTDQSGALT DMDRRGLHPM APEPAIDALG VALTRGETAL VVADVDWERF3540
 3541 YPAFAVARPR PLLHDIPAVA ALLAQDRDSD GDVQARSELA ERLAGTSESE RDRIVLTMVR3600
 3601 THVAAVLGHT GVDGVPAGRA FRDLGFDSLT AVELRNRLSK ATGVALPATL VFDHPTPEKV3660
 3661 AALVVADVLE QRGTALPGQT VVAASPDEPL AVVGMACRFP GGVASPEELW QLVISGGDAI3720
 3721 SGFPADRDWD LAALYHPDPD HVGTSYTREG GFLYDAGEFD PGFFGISPRE ALAMDPQQRL3780
 3781 LLETSWEAVE NAGIDPLSLR GRKVGVFTGM SYHDYAARLR SVPEGLEGYL GTGNAGSVMS3840
 3841 GRVAYVLGTE GPAVTVDTAC SSSLVALHWA AQALRQGECS MALAGGVTVM ATPGTFVDFS3900
 3901 RQRGLAPDGR CKAFAAGADG TGWSEGVGMV LVERLSDAER LGHPILAVIR SSAVNQDGAS3960
 3961 NGLTAPNGPS QQRVIRQALS TAGLTTADVD AVEAHGTGTN LGDPIEAQAL LATYGQDRPE4020
 4021 ERPLFLGSLK SNIGHTQAAA GVAGLIKMVM ALQHGVLPAT LHVDEPTPHV DWASGAVELL4080
 4081 TEATPWPETG RPRRAAVSSF GISGTNAHTI LEQAPVTEPT PVGGPQQSDD TPVGVLPWVL4140
 4141 SARGETALRG QSSRLADWVT ARPEDTAVEV ARSLMASRSA FEDRLVVLGA DREELLAGVR4200
 4201 AVARGEACSG VIRTPSGVSV PEGRAFLFTG QGAQRLSMGR ELAQRFPVFA SALDEVCVQL4260
 4261 DAHLERPLRE VLFAEPDTEA AALLDETVFT QAALFAVEVA LYRLVESWSL TPDYLLGHSV4320
 4321 GGLAAAHVSG VLSLEDAAEV VAARGRLMQA LPKGGAMVSL QASEDEVLES LQALETADRV4380
 4381 SIAAVNGPDT VVISGDDEAV TEVAGYWLVQ DRKVKRLKVS HAFHSVLMEP MLAEFEEVVS4440
 4441 RVTLNAPRIP VVSDSTGELL TAEQATSPAY WVGHVRKPVR FHQAVTYLAE QGVSAFLELG4500
 4501 PDGVLSAMVR NSLVDGEVIA TPLLRSGRAE PETALTALAE LFVAGVAVEW SAVLGGGESG4560
 4561 RRVELPTYAF QRERYWLESG AAAAAEPAVG GVIAHGMDAG FWGAVERGDV EGLAGVLGSG4620
 4621 VSVDVWGEVL PELSSWWLGR RARSVVEGWR YRVEWRRVGG GLLSGGGGLS GTWVVVVPVG4680
 4681 VDVGLVDGCV GALVGCGVRV VVVGVDVGVL GDVEGLGSLV VGGLPEGVGV GDVSGVVSLL4740
 4741 GLVEGWFEGL GGVSLGVVGT LGLVRALGGV GVVAPLWCVT RGAVGVGGGD VVVSPVQGLV4800
 4801 WGLGRVVGLE HPERWGGVVD LPVSVDGRGW ERFCSVLAGG GEDQVAVRSS GVFVRRLVPA4860
 4861 PAAVSGGGWV GGLSGGSVVV TGGTGVLGGR VARWLAGCGV GRLVLVSRSG AAGVGVDGLV4920
 4921 GELEGLGVVV DVVACDVADR EAMAGVLGGV SGEFPLRAVV HAAGASGMGA LEGLGVEEFA4980
 4981 GVVGAKVGGA VVLDELVGGV PLVLFSSGAG VWGGGGQGAY SAANAFLDGL AEYRRGRGLP5040
 5041 AVSIAWGPWA DGGMAHGPEG SQDQLVSRGF VPLDPDIAIA AMEEAIEKDE TTITVADIDW5100
 5101 AKFYPAFALA RPRPLLHEIP EVAALLAEDE AGVPEKGAVS ALAERLNSLT DGEQRQAVLD5160
 5161 MVRTEVAAVL NHAHAENIVE TRTFRELGFD SLTAVELRNR LNSATGLRLP ATLIFDYPTC5220
 5221 EAISDHLCKE LLGSSFGAMT TSAVQSDFWS ALQQVDYQKL QDAGVVAMVM GLLDGEPAEK5280
 5281 TVEEEPEPRP EIDEMDAVEL LNLALRNKMQ RNSAADSQGE EG

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