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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169771469
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPHTSGVDS PKNHRVGEHY GTHNPVPTIQ KFLEHLEKDK QDRKAHEEAV TAREKEEDAR  60
   61 GEAKPHKPRK RPGKGKTRMV TDPTTGREIE VEDQDADSME VVKNPKPKLT AYAKIKDVRT 120
  121 SPSQSLKDYK ENQDITAPPD PIAEGTTSDV PLHGEITNVL FHPTPSISYK PMYDQLEKRG 180
  181 TGLCIGIVFG ILFVGRMFGG SLWALFPLAA CIASGVWLWV QEVIRSGREM EWSSEKLRGQ 240
  241 IAIANLLPES VEWMNSFLGV IWGLINPEML SPIADTIEDI MQASAPSVVE NVRIAEIDQG 300
  301 NNPLRILSLR ALPDEHVQHI KDNVREENLK NKDPQEAAAM EEGGSYYNIE ASFAYHAKPT 360
  361 GQTASSKARN MHMQLVFYLG IRGLFGVPFP VFVELIEMVG TVRIRFQLMP EAPFMKDMTF 420
  421 SLVGIPHVRA GCMPMFKAGV NILNLPLISN FVNYAIGTAC GLFAAPKSMT MDLSMILKGD 480
  481 DIIKETQALG IMWVRIHRAI GLSKQDRRGS YGGGSDPYIN LSFSKYGKPM YCTRVITDDL 540
  541 NPVWEETAAL LVNPELISAD ENLSVELWDS DRNTADDIVG KVELPIREMI QHPARMYPQV 600
  601 SKLQGLNEGS EMPGELHWEV GFFGKPKLRP ELRTDGKKKD LPENLRDNPQ FQDDKGVITN 660
  661 EEEDAVTHTP PDPLWPSGIL SIVVHQIVNL QLANIKGSRY RKGREYEPAK PYGENTEEEG 720
  721 GDLPTSYCKI ILNDQLVYRT RPKAVSSKPI FNAGTERFVR DWRSAIVTVT VRDQRYREHD 780
  781 PILGVVPLKL SEILQTSSQV TRWYPLDGGI GYGRIRISLL LRHVETRLPP NMLGWDVGTF 840
  841 EFASDKIIAK NFNHRAKIKL RTGGSSGKIP RYVASIEGQD TSFNLTNGSL HKSIRLPVKH 900
  901 RYRSPVVFEF YSPGKHGAAA YAVLWLQHLV DNEDTPVDLP LWSTKNGKRL TQNYITEENW 960
  961 EAKREPGLED LQIIGRLQFT CRFTPGIDES HEHYVVDNHS RETYETWEAC IAEGVRPRSI1020
 1021 SLEVPEETEQ MHERSLVDGR DVLKHADPKE RRQWIDKQGQ DWSGAFGNDP SAFMDHDGHK1080
 1081 VAEPGRDKPP YSADGHSVEA VHPEEEDDDD EGSSVSSSSR TETSTEQRLS TANGSQLTST1140
 1141 DTPPSTTEDS LAGSSKENKH TKKANRRSEQ RQQRGMMQWK PARNAVFARD EAKFALRKVR1200
 1201 NRFTGNLTGR EPDIETETGN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle