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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169770933
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGDLKTKIG HGAAKALGIK IPYRDPLGVH ADPVTRGESM FSVGTIDTYS YLEPEPTPAE  60
   61 WLKEVCPSWH QVGRYFYNLF PFLSWITRYN LQWLLGDMIA GVTVGAVVVP QGMAYAKLAN 120
  121 LPVEYGLYSS FMGVLIYWFF ATSKDITIGP VAVMSTLTGK IVAEAQTKLP DVEGHVIASC 180
  181 LAIICGAVVC AMGLLRLGFI VDFIPLPAIS AFMTGSAINI CSGQVKDMLG ETADFSTKDS 240
  241 TYLVIINTLK HLPSAKIDAA MGVSALAMLY IIRSGCNYGA KKFPRHAKVW FFVSTLRTVF 300
  301 VILFYTMISA AVNLHRRSNP RFKLLGKVPR GFQHAAVPQV NSRIISAFAS ELPASIIVLL 360
  361 IEHIAISKSF GRVNNYTIDP SQELVAIGVS NLLGPFLGGY PATGSFSRTA IKSKAGVRTP 420
  421 LAGVITAVVV LLAIYALPAV FFYIPKASLA GVIIHAVGDL ITPPNTVYQF WRVSPLDAII 480
  481 FFIGVIVTVF TTIEIGIYCT VCVSVAILLF RVAKARGQFL GRVTIHSVIG DHLVQDDGKY 540
  541 GSANSPNAAS DDKDELSRSI FLPINHTDGS NPDVEVQQPY PGIFIYRFSE GFNYPNANHY 600
  601 TDYLVQTIFK HTRRTNPFSY GKPGDRPWNN PGPRRGKSED DESHLPLLQA VILDFSSVNN 660
  661 VDVTSVQNLI DVRNQLDLYA SPKTVQWHFA HINNRWTKRA LAAAGFGFPS PDSDEGFQRW 720
  721 KPIFSVAEIE GSASAAAHAE MVNNRHTQHN IKSEDLEHGL KHDSETTERE THGIEESSDA 780
  781 SSTREDKLQR DLKDSKAYRS RRRVAMVQGL NRPFFHIDLT SALQSALANA GEQPDPKMNV 840
  841 LDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle