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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|220699695, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRRRLAKDD NVQSASTDSS RDESKVVPAT QTATPAEKPK KESFVTKPRS KRRNGLIFVL  60
   61 GGIFGIIVAA FFANQQDVIS LDALMDLNLD ALMDVIPQGI VKDVREFSQH ERDAVSYDSF 120
  121 SVGLQLQSQG IQAKHPIVMI PGVISTGLES WGTEVSSRQY FRRRLWGSWS MMRALVLDKA 180
  181 EWKNHIMLDK DTGLDPPGIK LRAAQGFDAT DFFITGYWIW NKILENLATI GYDPTNAFTA 240
  241 AYDWRLSYLN LEVRDQYFSR LKSYIETAVL VKGEKVALAS HSMGSQVLFY FFKWVEHPEH 300
  301 GKGGSDWVNR HVASWINISG CMLGAVKGLT AVLSGEMRDT AQLNAFAVYG LEKFLSKEER 360
  361 AEIFRAMPGI SSMLPKGGEA VWGNATWAPD DLPGQHTSYG NLLKFQQTNS SLTAKNLTVS 420
  421 ESLAYLMNSS DEWYRNQVQT SYSHGVAHTT AQVEANENDP RTWLNPLEAR LPLAPDMKVY 480
  481 CFYGVGKPTE RSYYYQEERD PLVNLNVSID TTVTNSDGVD HGVVMGEGDG TVNLLSTGYM 540
  541 CAKGWNIKRY NPAGVKIKVF EMPHEPDRFS PRGGPNTGDH VDILGRASLN ELILRVAGGH 600
  601 GDEIEETFVS KIKEYADRVQ IFEEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle