YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169770419
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYYSLVFC LLVFEMVIFM GLIVPLPFTI KRKLFTFISE SPIIAKLQYG MKITFIFILI  60
   61 LFIDSVNRVY RVQLEVTNFS RENMGAAALG TDRMEVQARK FYSQRNMYLC GFTLFLSLIL 120
  121 NRTYTMILEV LRLEDKVKIL EGDKKAGGKD SARLAEAGNA GEIGRLKKEL DAKDRDIETL 180
  181 KKQCEGLTRE YHSLGDKVAG KTDDDTKKDL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.63
Transmembrane Helix	7	29	0.92
Cytoplasmic	30	48	0.64
Transmembrane Helix	49	66	0.80
Non-Cytoplasmic	67	210	0.58