YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83767250, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVANALAYHP TLAHYLRFVA TTVGRDKILR TLQYFSRFYA WYLYRTNRPQ SSIDPYNAVK  60
   61 KQFGTTRKIL RIGKFAEHLK AAAVAADNKS PVDPVLRYLA VGRQLGYAGY LTLDTITVID 120
  121 VIGFRKLAAA KRLQDTAYRS WLAGLICSAI ASVYSLWRLR EKERTLDRTE GEGVVEAKKL 180
  181 EKERSAARIQ LFSDLCDLTI PVSGLGLANL DDGIVGIGGT ISSLLGVVSQ WRKTA

Type	Start	End	Confidence
Cytoplasmic	1	136	0.65
Transmembrane Helix	137	157	0.81
Non-Cytoplasmic	158	212	0.61
Transmembrane Helix	213	231	0.43
Cytoplasmic	232	235	0.57