YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83767111
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWILPLLGYL GVIVGFSFLT LAIASGLYYM SELVEEHTVL TRRLLTRLIY SIILIQILLF  60
   61 VFDRFPFSLS LLGIGSHIVY ASNLRRFPIV KLSDPFFILS CVLVGLNHWL WFRHFSKPLP 120
  121 ASRAASSWRQ PYQINAEDMP TFTEVASYFG LCVWLVPFAL FVSLSAGENV LPSIGSEYAT 180
  181 GDHVSAPGFA RNTLTSDGKS KNKGMAKVLV DSVRDWVKEN GELMGFWRGE RSKRF

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.75
Transmembrane Helix	7	30	0.91
Cytoplasmic	31	43	0.72
Transmembrane Helix	44	62	0.83
Non-Cytoplasmic	63	64	0.52
Transmembrane Helix	65	84	0.57
Cytoplasmic	85	91	0.53
Transmembrane Helix	92	112	0.89
Non-Cytoplasmic	113	144	0.64
Transmembrane Helix	145	166	0.78
Cytoplasmic	167	235	0.68