YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238506933, gi...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGSDIFLAI LAIFFPPVSV WIKVGICTAD SIINLALCCL GYVPGLLHAW YIILKYPEQD  60
   61 PDDPYYEPVP GNAHRRDVEN GHVTYYYVSH QQIQHPSQRG YGTVAPTTAT PPLQQQSQST 120
  121 PKPQNEPAAG SSGDQTQGDS RPPPTYAEAV KGDHKVQD

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.54
Transmembrane Helix	6	25	0.74
Cytoplasmic	26	31	0.42
Transmembrane Helix	32	52	0.74
Non-Cytoplasmic	53	158	0.64