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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AKR1_ASPOR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGNSSTGT HTNGNFATLG SSPPSAVGGK GRAIPPKVTH EDASVELKTM NPERGAARGS  60
   61 IPLGEDIMQI ARIGEVPAMQ RLFDEKKFSA NHKDEEGITP LHWAAINNQY AMCKFLLDSG 120
  121 ADVNAKGGES VATPAMWAAQ RCHYYIVHLL LQRGADPLLT DVQGYNILHL ATIDGNAFLL 180
  181 VLLLHQEIPV DVVDQQGHTG LMWAAYKGYP ALVDLFLRWG AHANAVDEGG LTPLHWALVK 240
  241 GSLPCVLKLI EYGADKFAKT RDGKTPAVVA GEMNTTRVWY RALDEYGYDL DGNAKVSSSG 300
  301 LASWVRNKSL MSKFFFLWPF AIVFAAVWIL SNMVVYAAIP MMLVTVFGLQ WVAQKAASQG 360
  361 PSEYRILQKT PYLSGVFAGS LFWVGFRYVF YVLPVTYSTS PILNGLFAIF FSLTTYFYIY 420
  421 SMVEDPGFVP KLGSRNQQRA VITELFEQWK FDEENFCVSC MVRRPLRSKH CKRCARCVAK 480
  481 HDHHCPWIDN CVGANNLRHF VLYITCLEVG IVLFVQLTFN YINSLPAPAQ PQCNIINETL 540
  541 CDFVLRDTFT LVLDLWVCIQ LVWITMLVAV QMIQISRNQT TYENMRGHSV DRSYPSSRAF 600
  601 ASAVAAGTTS LNAAGLTSSG QGPNPALAQG APRHRKHGCL QQWSSLLGID TFFATARDGL 660
  661 RDGPRAVRPK NPFSRGVVTN CRDFWCDPAP YFGKREPGAA MLGGEVINYN RMYETPSRMH 720
  721 SGGGYQSLSV EDPEQGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle