YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83774859
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRTLLPRAA PRAALRTARP QSVPSNFVAA PTLSFFSKRG YASESGEHDL VIIGGGVAGY  60
   61 VAAIKAGQEG LKTVCIEKRG RLGGTCLNVG CIPSKSLLNN SHLYHQILHD TKKRGIEVGD 120
  121 VKLNLEQMMK AKDTSVEGLT KGIEFLLKKN GVDYVKGTGA LVDPNTVKVN LLEGGEQTLR 180
  181 GKNILIATGS EATPFPGLNI DEKRIITSTG ALSLQEVPKK MVVIGGGIIG LEMASVWSRL 240
  241 GAEVTVVEFL NQIGGPGMDA EIAKQAQKIL SKQGIKFKTG TKVTKGDDSG ASVSISVESA 300
  301 KGGKEETLDA DVVLVAIGRR PYTEGLGLEN VGIEKDERGR LVIDQEYRTK VPHIRVVGDC 360
  361 TFGPMLAHKA EEEAVAAVEY ITKGYGHVNY GVIPSVMYTH PEVAWVGQNE AEVKAAGIKY 420
  421 RVGTFPFSAN SRAKTNLDTE GQVKFIADAE TDRVLGVHII GPNAGEMVGE ATLAVEYGAS 480
  481 CEDIARTCHA HPTLSEAFKE AAMATYSKAI HF

Type	Start	End	Confidence
Signal Peptide	1	42	0.54
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	512	0.99