YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169780854
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMLPTRAA RTIACSACRT IVCPSTIGSA SLLRRGLSTS TEQTPVDYAD KPRWSYTPPS  60
   61 AKAPFSLRLN SKRRDYPVNT DPQVLDEFYI RMLGNDGDKL LSDETKWLAV THKSFDQGRR 120
  121 GFNDRLAFLG RRIVELQASL AMVQSPGSAA STAAPDEFDR VPFTHPALEG LENLTRHKNY 180
  181 LIGKAQLAEL AQKYELQKVL RWSPRKPNNL ASSGIELVLA HTMYAIVGAI SLEKGGLVAN 240
  241 KVTRERILEP LGFKA

Type	Start	End	Confidence
Signal Peptide	1	30	0.74
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	255	0.97