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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VAC8_ASPOR
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGIASACLS CLSTVDRWCH ITACLGPIGG RSRDGIYETT LADNEREAVS DLLGYLENRA  60
   61 ETDFFRGEPL SALSTLVYSD NVDLQRSASL TFAEITERDV REVDRDTLEP ILFLLQSSDI 120
  121 EVQRAASAAL GNLAVNADNK VLIVALGGLA PLIRQMMSPN VEVQCNAVGC ITNLATHEDN 180
  181 KAKIARSGAL GPLIRLAKSK DMRVQRNATG ALLNMTHSDD NRQQLVNAGA IPVLVQLLSS 240
  241 SDVDVQYYCT TALSNIAVDA SNRKRLAQTE SRLVQSLVHL MDSSTPKVQC QAALALRNLA 300
  301 SDEKYQLEIV RAKGLPPLLR LLQSSYLPLI LSAVACIRNI SIHPLNESPI IDAGFLKPLV 360
  361 DLLGSTDNEE IQCHAISTLR NLAASSDRNK ELVLQAGAVQ KCKDLVLKVP LSVQSEMTAA 420
  421 IAVLALSDEL KPHLLNLGVF DVLIPLTESE SIEVQGNSAA ALGNLSSKVG DYSIFVRDWA 480
  481 DPNGGIHGYL KRFLASGDPT FQHIAIWTLL QLLESEDKRL ISYIAKSDDV VHMVKSISDK 540
  541 NIESDEEDQE DGEGEVIALA RRCLEFLGNG PRQTLVEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle