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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83769118
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVDRRQAAV FAGAFALRLL LLVLFPSLPD LLTGRVEVST PVTSFKRLQE GLFLYTRNVS  60
   61 PYDGGVFHQA PLFLPIFALL PNARELPLPT ALFYSLIDLI NANALITISD SGQAVSGRLF 120
  121 SALRKHIRWD GVSVAAWFLF NPFTIATCLG RSTSVFTTTG ILYALSSAVS GNTLNAMLSL 180
  181 GFASYLSIYP ALLFIPLVLL CYDRRAQGPK PPSGVAIFAI QHMAVFLLSI AGLLGISCLV 240
  241 VGDFSQFISA TYGFQLLVPD LTPNVGLWWY FFIEMFDSFR EFFLGVFWLH LAAYVGGLTV 300
  301 RLRRQPLFVI TSLLGIFAVF KPYPSISDAS LYFALLPLYR HLFPLMRYTF FAVSALLYAT 360
  361 LLGPAFYHLW IYAGSGNANF FYAITLVWSL GLSILLADTI FAVLRDEWEQ ENPEMRGKEA 420
  421 RQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle