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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83766381
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.32
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKCRDIVI LGTGVFIAWG LAVRCLPVLR YLGYAVGLGI LLASVAFFGL VLFTTRSPND  60
   61 ADNSRSQCLP VAFLTPPNWQ VETQGLKKRS IYNPVSLYPQ SFMVSEGIDE LLALVTRDFI 120
  121 ASWYLGISPN PAFVTEVDRV FRAAIGNLRD RLLAEDLISL IVSRIFPILT THLKEFDVAE 180
  181 RSVRGRNLTR NVTESDELDI AIASKYRDGH LHPAAVLCLS DQKLVEQEYL RKVTVGLLPR 240
  241 LFPETVLSSR IVSVLVRELL SCAVLFPILS VLSDPDTWNQ LVEAYGRTAL QDRKTVRKLR 300
  301 AALDEHASPV PRSKHGNPFP RLSPTDSERA FERFVRAIRH CNNISDARRF RALVASQLKR 360
  361 ESMVEGQDPV YLRRLETGKR VLDQKVAKLS APASSRASHA TAATTHFRPL KSSPAQEASL 420
  421 VDVMHDASGL SYFMEFMDRQ QLMFLVQFWI VVDGLRNPLE DDFGDETSPS STTWTETDKN 480
  481 DMALISETYL SKPQLKVTAE SRRAVKTFLS AGKRATPEQY RKARTVILTT QSAVLEELQN 540
  541 VYYPKFRQSD LFYKYLASDE TSHFEPHTAA VPHGDVTPAA EVFERRPLPP LMGHLRYNDA 600
  601 SSSRLSSNDR YPQSPRSSVE STRVDDKTKP NISSLGLVDE SSRLGVFADD LFPDHHKFIE 660
  661 DEYEEPAEIE DKDPADEVHE APPGDLGLTE AIEALTAEIE KLGSQESVVD ALTRKAELTN 720
  721 NTAELRILRK SKASIQREVR RKDMQRQQYM IQESDNSLYG RSTVRITSIV VGKEEDGREF 780
  781 AMYVVEVQRN AGEQMPAASW VVARRYSEFH ELHHKLRMRY PSVRHLEFPR RRMVMKLQRE 840
  841 FLQKRRLALE AYLQKLLLLP EVCRSRDLRS FLSQRAIIPR DEAPRDGETK DLVTRIYNSV 900
  901 ADGMDDFLGN FGVLDQLSTA GQNLISAATS QQASTITDSG LATEDAVTAA EAEAELNAFE 960
  961 DRELEPFIKP ICDLFLEAFE LNRGNNWLRG RAVVVVLHQL LGGTIERKVR EGARSLAQDE1020
 1021 SLLRYISVVK ESLWPGGLLR ENRIRTTSER LKSRTEASLV LATLIPDMAG NVVGRTNAQG1080
 1081 AARRIFATLN NRRLNTHLMY TILDEIVLVL FGGGETGRMR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle