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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83766058
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDGLLRVFW PYDLPRTPSQ GVIIGWKNSE LDLFVLTVLE DVEPRNVDNA LRAGILFRNS  60
   61 PHPIVRIFTL CGRSAMHVLG TTNPREPPTA FNPSHLYVNT HPSYKIPRIY CPPETNVSVQ 120
  121 VIMFHRPHPT RMEYMSLEPI SLALGDKVST ADKSDSVSDK IDTEEERDKA QSQKLVEKLK 180
  181 LHTVVKHVPS HKEQALPLII NQVNCAYEMG KLMEKNSHLI GIRVKRSMSV GERVVESATT 240
  241 LWDLFVLGVS YVFWQWVWPV VTRIFVIGLV FHRTIAEIVL QILEWRARPD AAALKDISAT 300
  301 AQQVDIRLQQ FCYWPIQYVK LRQRKDNWES VTTSHPDYIR FYNSLWLVAN DVIIGIALGS 360
  361 YIIDNANWVA LQINSILTGW TVEGLQRTIS WLMDWPAGLK LNNELAAFLG DLFLWVIENW 420
  421 AAFIANLQPY LPHVIYVVGC SSFAGASMPI ALFSDLVSIL TVHIYSFYIA SARIFNWQLT 480
  481 IIISLFHLFR GKKRNVLRNR IDSCDYDLDQ LLIGTILFTV LFFLLPTIIV FYLAFATARM 540
  541 SIISVKAALD TCLAFLNHFP LFALMLRVKD SRRLPGGVHF ELREEHDKSS NTDSASTVPY 600
  601 IHLESIPLTL RAMFDQYFQL GHRLRKHYLS PRVIFCLVTG RFVPPIHRRN LYSMQYSMLP 660
  661 ARRAGMAEVW SLLTQPRKAN SGSGGSSTMV GGMGATANGL LKVPNGFGQG DMRRRGHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle