YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89275688, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKQKCAGLH MLLLLYVRLM LAVDAYRPQR DTNQEKWEQE LREAGSLDEL LMLTEYPDWK  60
   61 LWRCRLKLKH FDDVTPPENR RSTRYAAASF SPEMLKDIDD EWQKTQCMPR ETCVDVAKEL 120
  121 GTNTAVFFKP PCVSVFRCGG CCNKEGVTCR NTSMTYVNKT ILSVSLAPYI SGPEPVLVKI 180
  181 ANHTECKCQE HSLIRRHARE RHRKNSCSPT RKPEDKRLCN KGLIWDWMAE RCVTYPSSKQ 240
  241 EPPSAITEED CEMDVERCEC IPKEWTHRLH YT

Type	Start	End	Confidence
Signal Peptide	1	25	0.94
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	272	0.99