YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|92878802, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQQSLIYSF VARGTVILAE YSDFTGNFTT IALQCLQKLP ASNNRFTYNC DGHTFSFLVD  60
   61 NGFTYCVVAV ESVGRQIPIA FLERIKDDFN KRYGGGRATT ATAKSLNKEF GPKLKEQMQY 120
  121 CVEHPEEVSK LAKVKAQVSE VKGVMMENID KVIDRGEKIE VLVDKTENLR SQAQDFRQQG 180
  181 TQLRRKMWYQ NMKIKLIVLA IIIALILIIV LSVCHGFSC

Type	Start	End	Confidence
Cytoplasmic	1	193	0.98
Transmembrane Helix	194	216	0.92
Non-Cytoplasmic	217	219	0.82