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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92895780, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDRSDYKSQ YMDGQRESSF RWDFLDSKLS SSSDVRVTKS GFSIDKLNHG SHGSSTTSRS  60
   61 FKKGMRKGSE GLKLIGRSLG LGVSKAVFPE DLKVSEKKIF DPQDKFLLLW NKLFVISCIF 120
  121 SVFVDPLFFY LPVINDQLHC LGIDRKLAII VTTLRTVIDA FYLLNMALQF RTAYIAPSSR 180
  181 VFGRGELVID SAQIAKRYLR RYFIVDFLSV LPVPQIVVWR FLQRSKSSDV LATKQALLFI 240
  241 ILLQYIPRFL RMVPLTSELK RTAGVFAETA WAGAVYYLLL YMLASHIVGA FWYLLAIERN 300
  301 DSCWQNACSD NGCNKNYLYC ENQHTEGYSA WQNKSKAIFK SKCSVDDDPP PFDYGIFKQA 360
  361 LSSGIISSKK FITKYLYCLW WGLQNLSTLG QGLQTSTYPG EVIFSIALAI AGLILFALLI 420
  421 GNMQTYLQSL TLRLEEMRVK RRDSEQWMHH RLLPKELRER VRRYDQYKWL ATRGVDEDIL 480
  481 VQSLPKDLRR DIKRHLCLAL VRRVPLFESM DERLLDAICE RLKPCLFTEN TYIVREGDPV 540
  541 DEMLFIIRGR LESVTTDGGR SGFFNRTYLK EAEFCGEELL TWALDPRSGS NLPTSTRTVK 600
  601 ALTEVETFAL TADELKFVAS QFRRLHSRQV QHTFRFYSQQ WRTWAACFIQ AAWRRYCKKK 660
  661 IMKLRMKEEE ADESHGNASG SSSSLGAALL ASKFAARTLR GVHRNRLAKT ARELVKLQKP 720
  721 PEPDFTADDA D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle