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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92893997
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRPVAAIF SDQMEKSTTK SHNSRIFFLA SLSAFFWLLL LYFHFIILPH QQSSTTVNIQ  60
   61 QPPPRKHFGF PDIKKTDPCG GRYIYVHNLP SRFNQDMLRE CKTLSLWTNM CKFTTNAGLG 120
  121 PPLENIDGVF SDTGWYATNQ FAVDVIFANR MKQYECLTND SSIAAAVFVP FYAGFDIARY 180
  181 LWGYNISMRD AASVELVDWL MKRPEWGVMN GRDHFLVAGR ITWDFRRLSE DEKDWGNKLL 240
  241 FLPAAKNMSM LVVESSPWNA NDFGIPYPTY FHPAKDKDVF VWQERMRRLE RKWLFSFAGA 300
  301 PRPGNAKSIR GQIIEQCRSS KVGKLLECDF GESKCHSPSS IMQMFQGSVF CLQPQGDSYT 360
  361 RRSAFDSMLA GCILVFFHPG SAYTQYTWHL PKDYTKYSVF IPEDDIRKRN VSIEERLSQI 420
  421 PEERVRIMRE EVISLIPRLV YADPRSKLET LKDAFDVSVQ AVIDKVTNLR KDIIEGRTDE 480
  481 NFIEENSWKY ALLDEGQHEV GPHEWDPFFS KPKDGNGESS DSSAEVAKNS WKNEQRTQS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle