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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92891796
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVETSTLGRF HHQRLDFKRC VPAFITSHKT LFMVLWIAAF LSVFIWQRNM VVGGFMVFGR  60
   61 VPVRPIPNMR PVVFNLTDFG GVGDGVTLNT EAFERAVSAI SKFGKKGGAQ LNVPPGRWLT 120
  121 APFNLTSHIT LFLAQDAVIL AIDDEKYWPL MPPLPSYGYG RERPGPRYGS LIHGQNLKDV 180
  181 VITGHNGTIN GQGQAWWKKF RQKRLNYTRG PLLQIMWSSD IVITDITLRD SPFWTLHPYD 240
  241 CKNLTIKGVT ILAPVFEAPN TDGIDPGKYL LFYQGAGLLR CQYFRDSCED MLIEDCYISV 300
  301 GDDAIAIKSG WDQYGIAYGR PSMNIMIRNL VVRSMVSAGI SIGSEMSGGI SNVTVENLLV 360
  361 WDSRRGVRIK TAPGRGGYVR QITYRNITFE NVRVGIVMKT DYNEHPDDGY DPTALPVIRD 420
  421 ISFTNVYGHG VRVPVRIHGS EEIPVRNVTF RDMSVGLTYK KKHIFQCAFV HGRVIGTIFP 480
  481 SPCENLDRYN EQGQLVKHSM SQNVTDIDYD F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle