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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92891350
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKPSAADNR TRSSVQIFIV VGLCCFFYIL GAWQRSGFGK GDSIALEITK NNAECDVVPN  60
   61 LSFDSHHAGE VSQIDESNSN TKVFKPCEAR YTDYTPCQDQ RRAMTFPREN MNYRERHCPP 120
  121 EEEKLHCMIP APKGYVTPFP WPKSRDYVPY ANAPYKSLTV EKAIQNWIQY EGNVFRFPGG 180
  181 GTQFPQGADK YIDQLASVIP INDGTVRTAL DTGCGVASWG AYLWSRNVVA MSFAPRDSHE 240
  241 AQVQFALERG VPAVIGVFGT IKLPYPSRAF DMAHCSRCLI PWGANDGMYM MEVDRVLRPG 300
  301 GYWVLSGPPI NWKVNYKPWQ RPKEELEEEQ RKIEEVAKKL CWEKKSEKAE IAIWQKMTDT 360
  361 ESCRSRQDDS SVEFCESSDP DDVWYKKLKA CVTPTPKVSG GDLKPFPDRL YAIPPRVSSG 420
  421 SIPGVSSETY QNDNKMWKKH VNAYKKINSL LDSGRYRNIM DMNAGLGSFA AAIHSSKSWV 480
  481 MNVVPTIAEK STLGVIYERG LIGIYHDWCE GFSTYPRTYD LIHANGLFSL YQDKCNTEDI 540
  541 LLEMDRILRP EGAVIIRDEV DVLIKVKKLI GGMRWNMKLV DHEDGPLVPE KVLIAVKQYW 600
  601 VTDGNSTSTQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle