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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|92887497
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVSNVNKLL VKRAPSKTLV VRFNLFCFAI FLIVYATLLL RLPSSVYFDS AASLVGCSLR  60
   61 ECHHKAEKGI QIKGVLEELP KPKSWKPKAN GTKIEVPNFL GEKIGKEMKI GMVNMNEDDD 120
  121 ISEWNIHGEI IPINFDKVSQ FFNWKDLFPE WIDEEEESEV PTCPELPMPE FATYENMDII 180
  181 VAKLPCKYPE EGWAREVLRL QVHLMVANMV VKKGKKDWKR KSRVIFWSKC RPMLEIFRCD 240
  241 DLVNHEGDWW FFEVDVKRLE QKVSLPVGSC NLALPIWEQG IDKMEQNVRS KTRAKHEAYA 300
  301 TILHSSERYV CGAITLAQSL LKTGTKRDLI LLIDSSISVR KRHALKGAGW KIRTITRIGN 360
  361 PRGKNGTYNK YNYTKIRLWQ LSDYEKIIFI DSDILVLRNL DILFNFPQMS ATGNARSIFN 420
  421 AGMMVIEPSD CTFSVLMNLR HDIVSYNGGD QGFLNEIFVW WHRLPNRVNY LKNFWANTTV 480
  481 EASVKNGLFS ADPPKLYAIH YLGLKPWHCY RDYDCNWDVV DQRVYASDVA HQRWWNFHDR 540
  541 MDKNLQSFCR LTRQRRTELN WERRRSSNMG SLDYQWKVKV IDPRNSDSHL MD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle